The ITCC-P4 PDX platform of pediatric cancers for preclinical testing (Open DataScope)


Cancer is the leading cause of disease-related deaths among children in high-income countries. Tumor heterogeneity and lack of mechanism-of-action-based therapeutic options are key challenges to overcome in order to improve pediatric cancer patients’ survival. Here, we report the EU-IMI-2 funded public-private partnership “ITCC-Pediatric Preclinical Proof-of-Concept Platform” (ITCC-P4), which has built a large repertoire of patient-derived xenograft (PDX) models, representing all major solid pediatric cancer types, for in vivo drug testing. Three-hundred-fifty-three PDX models from diagnostic and relapsed pediatric cancers have been established and molecularly characterized, together with matched germline/tumor samples. As proof-of-concept, we present in vivo drug screening data in neuroblastoma and rhabdomyosarcoma models. PDX data, accessible here, allow the selection of models based on oncogenic drivers and/or potential biomarkers for preclinical testing. Operated by a non-profit entity (www.itccp4.com), this sustainable platform aids academic and industrial researchers in developing and prioritizing innovative therapies for pediatric cancer.

Please note that this version has data limited to Driver genes only.
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ITCC-P4 Open Publication Version
Explore the metadata characteristics of the cohort
Assess the expression data in the PDX models
Use the data driven embedding to identify PDX models of interest
Explore the somatic mutations in the PDX models
Explore the rich multi-omics data from a single sample perspective
Find PDX models that harbour events in your gene of interest
View the aberrations on manually curated events in the cohort
Plot methylation derived copy number profiles (Conumee) of the PDX samples

Useful Links
ITCC-P4 Website


This R2 DataScope belongs to the EU IMI2 project of ITCC-P4.